PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D03G0280
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 187aa    MW: 21705.3 Da    PI: 8.95
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D03G0280genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.74.6e-1279136562
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                  ++ rr+++NRe+ArrsR RK++ +e+L++ v  L  eN++L ++l+ l  ++  +k++
  Gh_D03G0280  79 RKRRRMISNRESARRSRMRKQKHLENLRNQVNRLRIENRELNNRLKFLLYHCHCVKTD 136
                  5789**************************************9999888888776665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.3E-1072127No hitNo description
SMARTSM003384.9E-1475139IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.01377126IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.3E-1179129No hitNo description
PfamPF001702.7E-979136IPR004827Basic-leucine zipper domain
CDDcd147022.49E-2080131No hitNo description
PROSITE patternPS0003608297IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    Send to blast
MSFTIPAGFS SDSMVDFDQF TGFETGFTPW DCSELFPPTT QSIEPAGSGS GSDETNQNQT  60
NSSSSLDQPN QLVSVIDERK RRRMISNRES ARRSRMRKQK HLENLRNQVN RLRIENRELN  120
NRLKFLLYHC HCVKTDNDRL RSEYSILRQK LSDIRQILLF KQLQQYSSAW PCYNVATMSD  180
QIPSLTT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17882RKRRR
27899RKRRRMISNRESARRSRMRKQK
39198RRSRMRKQ
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJX5847428e-92JX584742.1 Gossypium hirsutum clone NBRI_GE18127 microsatellite sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012469668.11e-138PREDICTED: basic leucine zipper 43-like
TrEMBLA0A0D2QF141e-138A0A0D2QF14_G
STRINGVIT_00s0541g00020.t013e-62(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM33382665
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.14e-29basic leucine-zipper 5